Open in new window / Try shogun cloud
--- Log opened Sat Sep 21 00:00:08 2013
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travis-ci[travis-ci] it's Sergey Lisitsyn's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1160852903:13
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shogun-buildbotbuild #461 of nightly_all is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/nightly_all/builds/46103:23
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wikingyo08:41
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van51I got an error on travis12:56
van51[ERROR] In file /home/travis/build/shogun-toolbox/shogun/src/shogun/io/SerializableJsonFile.cpp line 104: Could not open file `/tmp/RandomFourierDotFeatures.uIPOCc' for reading!12:56
van51why could that be?12:56
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iglesiasgbrb15:42
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shogun-notifier-shogun: Fernando Iglesias :develop * c6cd562 / examples/undocumented/libshogun/metric_lmnnn.cpp: https://github.com/shogun-toolbox/shogun/commit/c6cd5629982ff86a1e7973244f69f1a74783aba415:48
shogun-notifier-shogun: Simple LMNN example for the C++ interface15:48
shogun-notifier-shogun: Fernando Iglesias :develop * ea52b8b / examples/undocumented/libshogun/metric_lmnnn.cpp: https://github.com/shogun-toolbox/shogun/commit/ea52b8bfeb0d9093d9d68f4e798925d84e122f8815:48
shogun-notifier-shogun: Merge pull request #1646 from iglesias/feature/lmnn_libshogun_example15:48
shogun-notifier-shogun:15:48
shogun-notifier-shogun: Simple LMNN example for the C++ interface15:48
shogun-notifier-shogun: Fernando Iglesias :develop * cfcca79 / doc/ipython-notebooks/metric/LMNN.ipynb: https://github.com/shogun-toolbox/shogun/commit/cfcca798471319ac03abb04c8d16f4461aebf0d815:48
shogun-notifier-shogun: Add LMNN transform illustration to ipython notebook.15:48
shogun-notifier-shogun: Fernando Iglesias :develop * aea2c86 / doc/ipython-notebooks/metric/LMNN.ipynb: https://github.com/shogun-toolbox/shogun/commit/aea2c86c73a418edc34719728c4c92fa3568c92b15:48
shogun-notifier-shogun: Add LMNN ape gut data experiment to the notebook15:48
shogun-notifier-shogun: Fernando Iglesias :develop * 284c8cf / doc/ipython-notebooks/metric/LMNN.ipynb: https://github.com/shogun-toolbox/shogun/commit/284c8cf2e6c71f9c146e299cc0a9949b2ea9bba515:48
shogun-notifier-shogun: Update LMNN notebook using cross-validation15:48
shogun-notifier-shogun: Fernando Iglesias :develop * 70ae46a / examples/undocumented/python_modular/evaluation_cross_validation_classification.py: https://github.com/shogun-toolbox/shogun/commit/70ae46aab717a7695239bc36ca2aa2db764e6d3e15:48
shogun-notifier-shogun: Fix small mistake in CV example comment15:48
shogun-notifier-shogun: Fernando Iglesias :develop * 614ed94 / doc/ (2 files): https://github.com/shogun-toolbox/shogun/commit/614ed94340a67c1df191d287a377b4dde6ddc9e315:48
shogun-notifier-shogun: Merge pull request #1645 from iglesias/feature/lmnn15:48
shogun-notifier-shogun:15:48
shogun-notifier-shogun: Feature/lmnn15:48
pickle27iglesiasg, around?16:05
@iglesiasgpickle27, hi! yes, tell me16:05
pickle27iglesiasg, i was just wondering if you could take a look at my PR16:05
@iglesiasgpickle27, already did16:06
pickle27awesome!16:06
@iglesiasgpickle27, it is pretty much changes in Eigen from E types to VectorXd, MatrixXd16:06
@iglesiasgthe detail in the notebook16:06
@iglesiasgmm I think I missed the off by one error you mentioned in the commit log16:06
@iglesiasgbut I guess you already checked that16:06
@iglesiasgtravis already finished?16:06
pickle27iglesiasg, yeah and I made up the EMatrix typedef basically because I didn't see the MatrixXd type16:07
pickle27the off by one was a <= instead of a <16:07
@iglesiasghaha ok that explains why maybe I didn't realize hehe16:07
@iglesiasgsubtle detail16:07
pickle27iglesiasg, ah travis is still going16:07
@iglesiasgoh it crashed16:07
@iglesiasgunit-StreamingHashedDocFeaturesTest16:08
@iglesiasgI think it is not the first time I see that failing16:08
@iglesiasgvan51, hi! Would you mind taking a look at that? ^16:08
@iglesiasgif I am not mistaken, that should be from your project16:08
van51iglesiasg: ok I can check it out16:09
pickle27iglesiasg, yeah I see, I don't think anything I did would be responsible for that16:09
pickle27iglesiasg, anyways just wanted to touch base while I have internet16:09
@iglesiasgpickle27, I am restarting both jobs16:09
@iglesiasgI guess they will go fine16:09
pickle27sounds good16:09
@iglesiasgvan51, thanks! I will create a github issue just in case so we don't forget. Feel free to close once you fix it ;)16:10
van51iglesiasg: ok :)16:10
van51iglesiasg: can you reproduce it atm?16:17
@iglesiasgvan51, didn't try. I have just seen it a couple of times in travis16:18
@iglesiasgI have pasted the exact error in the issue16:18
van51iglesiasg: yeah I saw that and thanks!16:18
van51iglesiasg: I just can't reproduce it locally16:19
@iglesiasgmm I see16:19
van51iglesiasg: I will have a loot at the test anyway though16:19
@iglesiasgcool , thanks16:20
shogun-buildbotbuild #1511 of cyg1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1511  blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>16:32
shogun-buildbotbuild #117 of precise - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/precise%20-%20libshogun/builds/117  blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>16:39
@iglesiasgpickle27, there is something fishy with the PR in octave modular16:47
pickle27iglesiasg, do you have a link?16:49
@iglesiasgpickle27, https://travis-ci.org/shogun-toolbox/shogun/jobs/1162849916:49
@iglesiasgI just restarted again the build though16:49
@iglesiasgapt-get install fails, weird16:49
pickle27hmm okay16:50
pickle27I am rebuilding with octave on my system16:50
@iglesiasgI think it is something with travis though16:52
@iglesiasgprobably unrelated to your changes, but yes, maybe it is better to assure it16:52
van51iglesiasg: so if I run the test 1000 times I can reproduce it :P17:08
@iglesiasgvan51, haha it is something17:08
@iglesiasgvan51, is there randomness in the algorithm?17:08
van51iglesiasg: I think it has to do with the floats that are used there instead of doubles17:09
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van51iglesiasg: the data passed are randomly generated17:09
van51iglesiasg: I limited them to [0,1] and I think it's fixed17:09
@iglesiasgok17:09
van51iglesiasg: will double check and make a PR17:09
@iglesiasgvan51, sounds good!17:09
van51iglesiasg: btw do you know if there is a reason we used float32_t instead of float64_t in streaming features?17:10
van51I just noticed it17:10
@iglesiasgno idea17:10
@iglesiasgvan51, I thought we always use float6417:10
van51iglesiasg: so did I.. maybe it has been left like that since it was originally written17:11
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@iglesiasgit could be, and it might be worth changing17:11
van51iglesiasg: I'll make a seperate PR for that as well then later17:11
@iglesiasgcool17:11
shogun-buildbotbuild #26 of clang34 - static analysis is complete: Failure [failed analyse]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20static%20analysis/builds/26  blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>17:12
shogun-buildbotbuild #1512 of cyg1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1512  blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>17:12
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shogun-buildbotbuild #1861 of deb3 - modular_interfaces is complete: Failure [failed test ruby modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1861  blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>17:12
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shogun-buildbotbuild #13 of clang34 - undefined behaviour analysis is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20undefined%20behaviour%20analysis/builds/13  blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>17:22
van51iglesiasg: made a PR : https://github.com/shogun-toolbox/shogun/pull/165017:32
van51iglesiasg: I also changed a few other stuff but they are trivial17:32
van51iglesiasg: let's see if travis complaints again!17:32
@iglesiasgvan51, thanks! Yes, let's see17:33
shogun-buildbotbuild #17 of clang34 - thread analysis is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20thread%20analysis/builds/17  blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>17:36
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pickle27iglesiasg, it failed on apt again17:59
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travis-ci[travis-ci] it's Fernando Iglesias's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1162917117:59
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@iglesiasgpickle27, yes18:00
@iglesiasgand it has just failed in this other commit ^18:00
@iglesiasgso now we know it is not because of your commit :D18:00
@iglesiasgpickle27, maybe it is caused by some package renaming18:01
pickle27iglesiasg, okay18:01
@iglesiasgpickle27, do you want to have a look at it? :)18:02
@iglesiasgI am adding some stuff to the notebook right now18:02
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travis-ci[travis-ci] it's Fernando Iglesias's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1162917018:02
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@iglesiasgI bet it is related to18:04
@iglesiasgWARNING: The following packages cannot be authenticated!18:04
@iglesiasg  liboctave1 octave-common octave liboctave-dev18:04
@iglesiasglast time it built correctly that warning was not ther18:04
@iglesiasgprobably related to the ppa for octave18:06
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shogun-buildbotbuild #19 of debian wheezy - memcheck is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/debian%20wheezy%20-%20memcheck/builds/1918:06
@iglesiasgsudo apt-add-repository -y ppa:dr-graef/octave-3.6.precise18:06
@iglesiasgsonne|osx, sonney2k, ping ^18:06
pickle27iglesiasg, okay cool18:09
pickle27iglesiasg, I just want to make sure everything is good with it now because I have some time to do work right now18:17
@iglesiasgI understand18:17
@iglesiasgpickle27, I think this is basically a travis-related thing.18:17
@iglesiasgpickle27, But let's do this. Let me merge your PR and see what the buildbot says, all right?18:18
pickle27iglesiasg, looks that way, and sweet18:18
shogun-notifier-shogun: Kevin :develop * e6020df / / (20 files): https://github.com/shogun-toolbox/shogun/commit/e6020dffc9ca961203bfd189ea448981c2627f0518:18
@iglesiasgthere you go18:18
shogun-notifier-shogun: replaced uneccessary eigen3 typedefs with proper eigen3 type. fixed an off by 1 error in amari index. added jade example to example makefile. added links to shogun in ica notebook.18:18
shogun-notifier-shogun: Fernando Iglesias :develop * a9d5ca9 / / (20 files): https://github.com/shogun-toolbox/shogun/commit/a9d5ca9e2747fab727157c05fc72acfbc8438ed118:18
shogun-notifier-shogun: Merge pull request #1647 from pickle27/develop18:18
shogun-notifier-shogun:18:18
shogun-notifier-shogun: replaced uneccessary eigen3 typedefs with proper eigen3 type.18:18
gsomixwiking, yo18:30
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gsomixwiking, there are `undefined reference' errors related to *.cc code that protoc produces. when I renamed it to *.cpp all works.18:42
shogun-buildbotbuild #2239 of deb1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2239  blamelist: Kevin <kevinhughes27@gmail.com>18:43
wikinggsomix: :S18:45
wikinggsomix: u should only add .cpp sources to src/shogun18:45
wikingas cc files are not being compiled18:45
pickle27wiking, nmatrix is on travis now but I still can't get it to build on my laptop18:46
pickle27fyi18:46
wikingpickle27: ?18:47
wikingelaborte18:47
wikingtoo dense info :)18:47
gsomixwiking, but protoc cannot produce *.cpp files.18:47
pickle27wiking, nmatrix is set up on travis and travis is green so you can see what they needed to build on ubuntu 12.0418:48
pickle27by looking at the .travis.yml file18:48
wikingpickle27: ah cool i'll check it out18:48
wikingthnx !18:48
pickle27wiking, np18:48
wikinggsomix: sure about this?18:48
gsomixwiking, btw how can I enable protoc for auto-generating code from *.proto files?18:48
pickle27wiking, one of their guys is focusing on making the build easy, they know its a problem18:48
gsomixwiking, need check it twice, ok.18:48
pickle27wiking, anyways it looks like it has improved but I'm still having issues here so its probably still not ready yet18:49
wikinggsomix: dunno really i'm not into protobuf stuff18:49
wikingpickle27: yeah all early stage projects suffer the same syndrome :P18:50
gsomixwiking, all that I need is run protoc command for *.proto files in shogun/io/protobuf18:50
wikingaaah18:50
wikinggsomix: that requires some cmake hacking18:50
gsomixwhile compiling18:50
gsomixcool :)18:50
wikingi can help u with that18:50
shogun-buildbotbuild #118 of precise - libshogun is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/precise%20-%20libshogun/builds/11818:50
wikingdo u have a PR?18:50
wikingor not yet18:50
wikingi'll send u a patch via emailb18:51
wiking*email18:51
wikingbut soon i have to leave18:51
gsomixwiking, not yet18:51
wikingso maybe u just get it tomorrow18:51
wikingi hope it's not too late :(18:51
gsomixwiking, no worry.18:51
wikingok cool18:51
gsomixOK, thanks!18:52
gsomixfighting with bytes now!18:52
lisitsynhey there18:54
lisitsynpickle27: welcome back18:54
pickle27lisitsyn, hey!18:55
lisitsynpickle27: how is it going?18:56
pickle27lisitsyn, good!18:57
pickle27lisitsyn, pushed some code clean up and then working on looking through roman's stuff18:57
lisitsynnice!18:57
pickle27lisitsyn, I don't have a good grasp on the gp stuff at all but his code looks pretty good18:58
lisitsynpickle27: yeah same thing with grasping gps ;)18:59
shogun-buildbotbuild #1862 of deb3 - modular_interfaces is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/186219:00
shogun-buildbotbuild #1513 of cyg1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1513  blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>19:04
@iglesiasgpickle27, so octave modular could build just fine in the buildbot ^19:04
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pickle27iglesiasg, excellent!19:10
pickle27wiking, for the record I did get the latest nmatrix to build just now, had to purge libblas aswell, I'm on there mailing list so I'll keep tabs and maybe it will be ready to merge the feature branch when they release a beta19:11
shogun-notifier-shogun: Fernando Iglesias :develop * c9bd97b / src/shogun/evaluation/SplittingStrategy.h: https://github.com/shogun-toolbox/shogun/commit/c9bd97b6690029ad704ecfe22efd4bd7dc4bc0d919:18
shogun-notifier-shogun: Update DOC regarding SGVector use in CV Splitting strategy19:18
shogun-notifier-shogun: Heiko Strathmann :develop * c6aded5 / src/shogun/evaluation/SplittingStrategy.h: https://github.com/shogun-toolbox/shogun/commit/c6aded5333cad67264628115781d9f0ecb86f8aa19:18
shogun-notifier-shogun: Merge pull request #1649 from iglesias/update/cv_doc19:18
shogun-notifier-shogun:19:18
shogun-notifier-shogun: Update DOC regarding SGVector use in CV Splitting strategy19:18
lisitsynwiking: ping19:30
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lisitsynwiking: I wonder what completion plugin do you use with ST3?19:30
@iglesiasglisitsyn, nooooo19:31
@iglesiasgvim!19:31
lisitsyniglesiasg: I am preparing to put vim to recycler bin ;)19:32
shogun-buildbotbuild #1781 of bsd1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/1781  blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>19:32
@iglesiasglisitsyn, why so?19:32
lisitsyniglesiasg: well st3 is much faster and looks better19:33
@iglesiasglisitsyn, what about shell integration?19:33
@iglesiasgfor me that is such a big plus19:33
lisitsyniglesiasg: what's with shell integration?19:33
lisitsynhmm how do you use it?19:33
@iglesiasglisitsyn, I like to use terminals that enable you to split the window19:34
@iglesiasgso when I am coding something that I want to test fast19:34
@iglesiasgI can just split the window19:34
@iglesiasgcompile, run, whatever I need19:34
@iglesiasgand go back to the coding part19:34
@iglesiasgjust with a few keystrokes everything19:35
lisitsynyeah you can set it up in ST319:35
@iglesiasgthat would be nice19:35
@iglesiasgmaybe I have to take a look at it19:35
lisitsynI am not ready to buy it yet but it seems it is already better19:36
lisitsynI don't care about its closed source because vim source is as well closed19:37
lisitsynbecause I have no idea how to read that cryptic thing19:37
shogun-buildbotbuild #1782 of bsd1 - libshogun is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/178219:37
lisitsynI cried for a few days once I took a look at vim's code19:37
van51iglesiasg: I think that PR is good to go ;)19:41
@iglesiasgvan51, do you need to get it merged soon?19:42
pickle27lisitsyn, i haven't tried st yet but I can't come to grips with a closed source editor19:42
@iglesiasgvan51, otherwise I rather if soeren has a look. He knows better what stuff is going on there :)19:42
pickle27just seems wrong19:42
lisitsynpickle27: why do you care? ;)19:42
van51iglesiasg: not really19:42
van51iglesiasg: sure19:42
@iglesiasgvan51,  I think he has been checking your PRs19:42
pickle27lisitsyn, i dunno honestly19:42
sonne|osxvan51: my shogun time starts when kids are in bed19:43
sonne|osxso no time yet :)19:43
lisitsynpickle27: I think it is ok to use whatever works19:43
van51sonne|osx: hehe it's ok :)19:43
van51sonne|osx: no hurry here19:43
pickle27lisitsyn, yea and I suppose a text editor is okay to be closed as nothing really needs to build on it19:43
pickle27system wise19:44
lisitsynpickle27: at least it makes its author motivated because anyone wants to have $19:44
pickle27lisitsyn, this is true19:45
pickle27anyways got to head out, might be back on later for a bit19:46
pickle27see you guys19:46
lisitsynpickle27: see you19:46
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@iglesiasgpickle27, see you19:46
* sonne|osx doesn't want to be dependent on closed source sw 19:46
sonne|osxNEVER EVER19:46
sonne|osxagin19:46
sonne|osxagain19:46
sonne|osxit took years to recover from the matlab plaque19:46
lisitsynsonne|osx: so you don't use android?19:46
lisitsyn;)19:46
lisitsynsonne|osx: ain't there any reason why everybody still use matlab?19:48
sonne|osxlisitsyn: cyanogenmod!19:50
sonne|osxlisitsyn: I have no idea why people use that crap19:50
sonne|osxmy only guess is the very compact error prone syntax19:50
sonne|osxwith loops being so slow that one cannot use loops19:50
shogun-buildbotbuild #27 of clang34 - static analysis is complete: Failure [failed analyse]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20static%20analysis/builds/27  blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>19:50
lisitsynsonne|osx: are you using cyanogenmod?19:50
sonne|osxlisitsyn: yes19:50
lisitsynheh man that's weird you even don't use android19:52
lisitsynI have no idea why do you care what software is running on your phone :)19:52
sonne|osxwell it is android right?19:52
lisitsynI mean 'default' one19:52
lisitsynpeople should use open source sw because it is better19:53
lisitsynnot just because it is open source19:53
sonne|osxlisitsyn: no19:54
sonne|osxyou use it to be independent19:54
sonne|osxif sth is annoying you you can fix it19:54
sonne|osxthere is no way to do that with closed source19:54
lisitsynI can't fix most of the glitches in open source19:54
sonne|osxbuy you can contribute to fixing it19:54
sonne|osxand this worked out fine for me many many times19:55
lisitsynyeah I can try but that's not really feasible19:55
lisitsynI can't fix anything in vim19:55
lisitsynbecause I am not bram19:55
besser82lisitsyn:  I just packaged tapkee for fedora  --->  https://bugzilla.redhat.com/show_bug.cgi?id=1010565  :D19:55
lisitsynI don't understand its cryptic code19:55
sonne|osxyou cannot when your closed source smartwatch shows you a NaN19:55
shogun-buildbotbuild #20 of debian wheezy - memcheck is complete: Failure [failed memory check]  Build details are at http://buildbot.shogun-toolbox.org/builders/debian%20wheezy%20-%20memcheck/builds/20  blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>19:55
lisitsynbesser82: haha thanks19:55
sonne|osxinstead of the time19:55
sonne|osxlisitsyn: but sure lots of effort19:56
besser82lisitsyn: why "haha"? Like in "haha, Milhouse"?19:56
lisitsynbesser82: I am surprised ;)19:56
besser82lisitsyn: thought this would be nifty at some point :)19:57
lisitsynbesser82: have you packaged its sample application as well?19:57
besser82lisitsyn: packaged tapkee_cli19:57
lisitsynoh okay thanks19:57
besser82lisitsyn: and src of examples/19:57
besser82for %doc19:57
lisitsyncool19:57
lisitsynI wanted to commit some updates rather soon19:58
besser82lisitsyn: You know "freedom, friends, features, FIRST" --> fedora  :D19:58
lisitsynbesser82: I should consider going fedora then ;)19:58
besser82lisitsyn: sure! go on :)19:59
besser82lisitsyn: if ya need some information, let me know ;)19:59
lisitsynbesser82: what's default DE in latest fedora?19:59
besser82lisitsyn: at your option :)20:00
besser82lisitsyn: GNOME3, KDE, MATE, Cinnamon20:00
lisitsynbesser82: no preference?20:00
besser82lisitsyn: GNOME3 is prefered, but you can easily choose on install20:00
lisitsynbesser82: what about kernel?20:00
besser82lisitsyn: F19 -->  3.10    F20 --> 3.1120:01
lisitsynbesser82: I see20:01
@iglesiasgall right guys, see you later!20:01
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lisitsynwell why not, besser82 I'll give it a try :)20:01
besser82lisitsyn: np :)20:01
besser82lisitsyn: if you want to become contributing, just ask me, too :)20:02
besser82lisitsyn: You're from russia? ain't you?20:02
lisitsynbesser82: like packaging?20:02
lisitsynbesser82: yes20:02
shogun-buildbotbuild #14 of clang34 - undefined behaviour analysis is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20undefined%20behaviour%20analysis/builds/14  blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>20:02
besser82lisitsyn: yes, like packaging;  you possibly want to try Russian Remix ;)20:03
lisitsynbesser82: oh well I have no russian in my computer20:03
lisitsynI always switch to english language in my os20:04
besser82lisitsyn: allright, russian remix has improved support for cyrillic langs20:04
lisitsynthe only thing I need is russian layout20:04
besser82lisitsyn: that's in regular fedora as well :)20:04
lisitsynbesser82: well one issue that is never solved is russian names in archives20:04
lisitsynno idea if they solved it in that remix20:04
lisitsynbesser82: I have bad experience with everything but ubuntu20:05
lisitsynI tried suse and got a lot of glitches I had no motivation to resolve20:06
besser82lisitsyn: suse is shit; has been good ~10 y ago20:06
lisitsynI tried debian and it was ok but when I installed some things it became even more buggy than ubuntu20:06
besser82lisitsyn: russian names in archives? like in bz2 or 7z20:07
lisitsynbesser82: especially in .rar20:07
besser82lisitsyn: that's no prob on regular fedora as well20:07
besser82lisitsyn: as well :)20:07
besser82lisitsyn: most improvent of russian remix is in i18n20:07
shogun-buildbotbuild #1514 of cyg1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1514  blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>20:08
besser82lisitsyn: so translatations of UI20:08
lisitsynbesser82: most of the russian 'advanced' users just don't bother with cyrillic stuff in their os20:08
lisitsynbecause you always know you gonna meet some trouble20:08
lisitsynlike you better don't name your folder ????????? in linux20:08
besser82lisitsyn: russian remix is mostly targeted like ubuntu, but for russian "average" user20:09
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travis-ci[travis-ci] it's Fernando Iglesias's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1163238520:09
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besser82lisitsyn: documents in cyrillic....20:09
lisitsynbesser82: it was easy ;)20:09
lisitsynbesser82: try ????????????20:09
lisitsynw/o gtranslate ;)20:10
besser82lisitsyn: no idea20:10
lisitsynme neither haha20:10
besser82lisitsyn: I just know a bit cyrillic20:10
lisitsynwell too many possible translations20:10
besser82lisitsyn: Iex-gf came from Macedonia20:10
lisitsynahh20:10
lisitsynyeah they use that ?????20:11
besser82lisitsyn: :D20:11
besser82lisitsyn: but my knowledge is basically limited to naming of foods XD20:11
lisitsynbesser82: so what does that package request mean?20:12
lisitsynare you already able to install it?20:12
besser82lisitsyn: not yet, but in ~2 days20:12
lisitsynha20:12
lisitsyncoo20:12
lisitsyncool*20:12
lisitsynbesser82: have you packaged shogun too?20:12
besser82lisitsyn: working on this20:13
lisitsynI mean I have seen you were working20:13
lisitsynahh20:13
lisitsynnot ready yet?20:13
besser82lisitsyn: basically yes, but no20:13
besser82lisitsyn: I'm waiting for review of NLopt20:13
besser82https://bugzilla.redhat.com/show_bug.cgi?id=100420920:13
besser82lysitsin: when that's done, I'll submit shogun for review20:14
lisitsynI see20:14
shogun-buildbotbuild #18 of clang34 - thread analysis is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20thread%20analysis/builds/18  blamelist: Fernando Iglesias <fernando.iglesiasg@gmail.com>20:16
besser82lisitsyn: I you are living "on the bleeding-edge" i'd recommend F20 for you, still pre-alpha, but I use it in everyday :)20:19
besser82lisitsyn: most of it is quite stable and mature20:19
besser82lisitsyn:  https://dl.fedoraproject.org/pub/alt/stage/20-Alpha-RC4/Fedora/20:20
besser82sonne|osx: any chance to get you "converted", too?  :D20:27
sonne|osxbesser82: man you are like some political party bus on a election spree for FC :)20:28
besser82sonne|osx: Sure, I'm an FC Ambassador :)20:28
besser82sonne|osx: I dealt with lot's of different distros in the past ~8 years and always came back to FC....20:30
sonne|osxbesser82: sounds like me talking about debian :P20:33
besser82sonne|osx: Everybody has his darling, right?  :-P20:33
sonne|osxbesser82: heh yes that too :)20:42
besser82sonne|osx: btw. anybody tried to compile shogun with new atlas release?20:43
shogun-buildbotbuild #1515 of cyg1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1515  blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>20:43
sonne|osxbesser82: which is?20:43
besser82sonne|osx: atlas-3.10.120:43
besser82sonne|osx: some severe changes afaik20:44
besser82sonne|osx: like dropped BLAS/LAPACK and some more20:45
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travis-ci[travis-ci] it's Heiko Strathmann's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1163360320:46
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sonne|osxbesser82: uh oh20:46
besser82sonne|osx: so one will need to explicitly link them when needed...20:47
sonne|osxit is in debian for w while though I don't know if we have a sid buildslave yet20:47
besser82sonne|osx: dunno, too20:48
besser82wiking: is there a debian sid build-worker, yet?20:48
besser82sonne|osx: for FC it broke half rawhide depending on atlas :(20:48
besser82sonne|osx: like arpack and such20:49
sonne|osxwell in debian it migrated to testing so I guess they fixed things by now20:49
sonne|osxaug 7 it went to testing...20:49
besser82sonne|osx: it's in rw since yesterday....20:49
besser82s/rw/rh/20:49
sonne|osxok20:50
besser82and I'm currently trying to fix arpack :(20:51
besser82the asshole, who pushed it isn't allowed to do mass-rebuilds20:51
besser82and didn't even mention the push on ml20:52
besser82so someone like me could have triggered that...20:52
besser82and see what breaks....20:52
besser82such crap _ALWAYS_ happenes on fridays :O20:53
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shogun-buildbotbuild #28 of clang34 - static analysis is complete: Failure [failed analyse]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20static%20analysis/builds/28  blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>, Fernando Iglesias <fernando.iglesiasg@gmail.com>21:08
shogun-buildbotbuild #21 of debian wheezy - memcheck is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/debian%20wheezy%20-%20memcheck/builds/2121:17
shogun-buildbotbuild #15 of clang34 - undefined behaviour analysis is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20undefined%20behaviour%20analysis/builds/15  blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>, Fernando Iglesias <fernando.iglesiasg@gmail.com>21:18
lisitsynsonne|osx: any chance to get rid of merkel this elections? ;)21:23
sonne|osxlisitsyn: same likelihood like getting rid of putin21:24
lisitsynsonne|osx: hahaha21:24
lisitsynsonne|osx: that P=0 event21:24
sonne|osxlisitsyn: P=epsilon21:25
lisitsynsonne|osx: no speaking about putin it is zero21:25
lisitsynsonne|osx: okay I am continuing this gdb issue21:26
lisitsynit tokk me a bit to understand what happens here in cmake21:26
sonne|osxlisitsyn: it didn't look so complicated21:27
lisitsynsonne|osx: true21:28
sonne|osxlisitsyn: the only thing that is not clear to me is how to check the return code of sth that got exectued21:28
lisitsynsonne|osx: yeah I am checking that now21:30
lisitsynwell you can put result into a variable21:30
lisitsynI just need to check what does it put here21:30
shogun-buildbotbuild #19 of clang34 - thread analysis is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/clang34%20-%20thread%20analysis/builds/19  blamelist: Heiko Strathmann <heiko.strathmann@gmail.com>, Fernando Iglesias <fernando.iglesiasg@gmail.com>21:32
sonne|osxsth is weird with cmake and tests21:33
sonne|osxwhen I change a single test all tests are compiled again21:33
gsomixsonney2k, sonne|osx if you have minute or two. https://github.com/shogun-toolbox/shogun/pull/165121:34
van51it may be a stupid question, but I'm trying to use a BoolVector in python and I keep getting TypeError: 'BoolVector' object does not support item assignment21:42
van51what am I missing?21:42
shogun-notifier-shogun: Soeren Sonnenburg :develop * 42ba9cd / / (6 files): https://github.com/shogun-toolbox/shogun/commit/42ba9cd65ca3f3ce75979e9797bd6a74954b0a3f21:43
shogun-notifier-shogun: move loading of sparse data into SGSparseMatrix21:43
shogun-notifier-shogun:21:43
shogun-notifier-shogun: - drop load_from_svmlight file from SparseFeatures21:43
shogun-notifier-shogun: - return an SGVector<float64_t> when loading with labels21:43
sonne|osxvan51: what is a BoolVector?21:48
van51sonne|osx: it should be a SGVector<bool>21:48
sonne|osxvan51: and how do you try to assign items?21:48
van51sonne|osx: x[0] = True21:49
van51sonne|osx: where x is a BoolVector21:49
gsomixvan51, my fault, it seems21:50
sonne|osxvan51: does RealVector work?21:50
van51sonne|osx: yea21:50
sonne|osxvan51: what was it?21:50
van51sonne|osx: I don't know :P21:51
van51sonne|osx: gsomix seems to have an idea21:51
gsomixsonne|osx, van51 I'll check. just need to compile python_modular21:52
van51gsomix: sure. thanks for looking  :)21:53
shogun-buildbotbuild #1783 of bsd1 - libshogun is complete: Failure [failed compile]  Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/1783  blamelist: Soeren Sonnenburg <sonne@debian.org>21:56
gsomixI can play the Angry Birds Star Wars II while compiling...21:58
shogun-notifier-shogun: Soeren Sonnenburg :develop * f4afdf8 / tests/unit/io/MLDataHDF5File_unittest.cc: https://github.com/shogun-toolbox/shogun/commit/f4afdf8b77d6bc691e01857339e1c83631f3561e21:59
shogun-notifier-shogun: use tmpname and unlink in mldata unit test21:59
sonne|osxlisitsyn: so what is the status?22:04
lisitsynsonne|osx: I'm fighting with strings22:04
sonne|osxlisitsyn: what strings?22:04
lisitsynsonne|osx: well22:04
lisitsynI need22:05
sonne|osxlisitsyn: btw any idea how to do sth like COMMAND python -c 'print "hello"' with cmake?22:05
lisitsynyes22:05
lisitsynyou write some script22:05
lisitsynthat does22:05
lisitsynexecute_command(COMMAND python -c 'print "hello"')22:05
* sonne|osx switches to a sane OS22:05
lisitsynsay it is runstuff.cmake22:05
lisitsynthen you do22:05
lisitsyncmake -P runstuff.cmake22:06
@sonney2klisitsyn, trying...22:07
lisitsynsonney2k: the problem I have now is proper spaces and " arrangement22:07
lisitsynsonney2k: ohh it seems I found the thing22:15
lisitsynso you have to use22:19
lisitsynsome cmake file22:19
lisitsynthat does the following22:19
lisitsynexecute_command(COMMAND ${CMD} ${ARGS} RESULT_VARIABLE CMD_RESULT)22:20
lisitsynI've been trying to combine cmd and args22:20
@sonney2klisitsyn, what will CMD_RESULT contain?22:21
lisitsynsonney2k: it seems code22:21
shogun-buildbotbuild #121 of precise - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/precise%20-%20libshogun/builds/121  blamelist: Soeren Sonnenburg <sonne@debian.org>22:21
lisitsynbut I am still checking22:21
shogun-buildbotbuild #1784 of bsd1 - libshogun is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/178422:24
@sonney2klisitsyn, yes indeed!22:24
@sonney2kjust tried22:24
@sonney2klisitsyn, so then the gdb thing is easy22:24
lisitsynsonney2k: do we need it for integration tests?22:24
lisitsynyes22:24
@sonney2kwhen a test doesn't return 022:24
@sonney2kyou run gdb --script src/shogun/.gdb test again22:25
lisitsynyeah that was clear22:26
@sonney2keasy then22:26
lisitsynsonney2k: integration? [y/n]22:27
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shogun-buildbotbuild #122 of precise - libshogun is complete: Success [build successful]  Build details are at http://buildbot.shogun-toolbox.org/builders/precise%20-%20libshogun/builds/12222:38
@sonney2klisitsyn, sure but it would already help me a lot to debug cyg122:40
@sonney2klisitsyn, if we had that just for unit22:40
lisitsynsonney2k: I started with integration so ok let me finish it with integration first22:41
lisitsynokay I am quite near22:41
lisitsynjust proper paths22:41
@sonney2kok22:41
lisitsynsonney2k: okay the problem now is22:45
lisitsynwe have .gdb in src/22:45
lisitsynbut cmake copies sources22:45
lisitsynto build/src22:45
shogun-buildbotbuild #1516 of cyg1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1516  blamelist: Soeren Sonnenburg <sonne@debian.org>22:48
shogun-buildbotbuild #1864 of deb3 - modular_interfaces is complete: Failure [failed test python modular test ruby modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1864  blamelist: Soeren Sonnenburg <sonne@debian.org>22:53
@sonney2klisitsyn, well just use ${ROOT_DIR}/src/.gdb22:58
lisitsynsonney2k: already done ;)22:58
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@sonney2klisitsyn, do you know how to expose e.g. PYTHON_EXECUTABLE in other cmake scripts?23:00
@sonney2kin particular version.cmake?23:00
lisitsynsonney2k: expose like?23:00
@sonney2klisitsyn, I need the variable defined23:01
lisitsynsonney2k:23:01
lisitsynINCLUDE(PythonEnvironment)23:01
lisitsynGET_PYTHON_ENV()23:01
lisitsynsonney2k: what about sth like that?23:01
lisitsynsonney2k: variables are propagated from the top to the bottom23:02
lisitsynso if you have it defined in some X.cmake and you include Y.cmake you will have all the variable23:02
lisitsyns23:02
@sonney2klisitsyn, I have no idea who includes version.cmake23:04
lisitsynsonney2k: then these two lines23:04
shogun-notifier-shogun: Sergey Lisitsyn :develop * 15675cb / / (4 files): https://github.com/shogun-toolbox/shogun/commit/15675cb4f90d5410943b8b8f1eb79de740de310823:05
shogun-notifier-shogun: Added gdb checker23:05
lisitsyndamn23:05
lisitsyna bit wrong23:06
@sonney2klisitsyn, but this won't re-do the python detection just get the python variables that were already detected?23:07
lisitsynsonney2k: I am afraid you have to re-do detection23:07
shogun-notifier-shogun: Sergey Lisitsyn :develop * 6f750b8 / cmake/checkgdb.cmake,tests/integration/python_modular/CMakeLists.txt: https://github.com/shogun-toolbox/shogun/commit/6f750b8ff57ac9fa49e28ceb324a3c75926d06e623:08
shogun-notifier-shogun: Proper gdb path in gdb checker23:08
lisitsynsonney2k: but version *should* be included somewhere right?23:08
lisitsynso you can rely on already detected python I think23:08
@sonney2klisitsyn, version is only run on make23:08
@sonney2kwhich is weird imho23:08
@sonney2kor maybe not23:09
lisitsynsonney2k: where is it scripted?23:09
@sonney2kno idea23:09
lisitsynsonney2k: src/shogun/CMakeLists.txt23:09
@sonney2kyeah23:09
lisitsynsonney2k: ah okay I know23:10
lisitsynsonney2k: just add23:10
lisitsyn-DPYTHON=${PYTHON_EXECUTABLE}23:10
lisitsynthen go back to version.cmake23:10
lisitsynand use ${PYTHON}23:10
lisitsynthe same thing I did with gb23:10
lisitsyngdb23:10
@sonney2kahh ok23:10
lisitsynoh unit-tests checking is not that trivial23:11
lisitsynI mean I have to extract what's failed23:11
lisitsynand then run with filter23:11
shogun-buildbotbuild #2246 of deb1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb1%20-%20libshogun/builds/2246  blamelist: Sergey Lisitsyn <lisitsyn.s.o@gmail.com>23:13
shogun-buildbotbuild #1785 of bsd1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/bsd1%20-%20libshogun/builds/1785  blamelist: Sergey Lisitsyn <lisitsyn.s.o@gmail.com>23:15
van51gsomix: any luck?23:16
shogun-buildbotbuild #1865 of deb3 - modular_interfaces is complete: Failure [failed test python modular test ruby modular]  Build details are at http://buildbot.shogun-toolbox.org/builders/deb3%20-%20modular_interfaces/builds/1865  blamelist: Soeren Sonnenburg <sonne@debian.org>23:19
shogun-buildbotbuild #1517 of cyg1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1517  blamelist: Soeren Sonnenburg <sonne@debian.org>23:21
@sonney2klisitsyn, if sth fails why not run everything with gdb?23:23
@sonney2klisitsyn, I mean it is per file basis23:23
@sonney2klisitsyn, the -D python works :)23:23
lisitsynsonney2k: but we have one unit-tests executable23:23
@sonney2klisitsyn, wait wait23:29
@sonney2klisitsyn, it should be easy23:29
@sonney2klisitsyn, we have one test per file!23:29
@sonney2kso just gdb that23:29
lisitsynI think we have one big executable23:29
@sonney2klisitsyn, yes we have one executable but we call it various times with different filters23:29
lisitsynsonney2k: I don't understand where does it happen23:30
@sonney2klisitsyn, maybe you don't need to care and just add the gdb thing23:33
@sonney2klisitsyn, I guess when called the right filters will be set23:34
lisitsynsonney2k: then I don't understand where to place that gdb thing yet23:34
lisitsyn:)23:34
-!- travis-ci [~travis-ci@ec2-23-20-209-1.compute-1.amazonaws.com] has joined #shogun23:40
travis-ci[travis-ci] it's Soeren Sonnenburg's turn to pay the next round of drinks for the massacre he caused in shogun-toolbox/shogun: http://travis-ci.org/shogun-toolbox/shogun/builds/1163748523:40
-!- travis-ci [~travis-ci@ec2-23-20-209-1.compute-1.amazonaws.com] has left #shogun []23:40
-!- votjakovr [~votjakovr@host-46-241-3-209.bbcustomer.zsttk.net] has joined #shogun23:41
@HeikoSlisitsyn, sonney2k I cannot build python modular here23:41
@HeikoS/home/heiko/Desktop/shogun/shogun/build/src/interfaces/r_modular/modshogunR_wrap.cxx:347347:15: error: 'class shogun::CSparseFeatures<double>' has no member named 'write_svmlight_file'23:41
@HeikoSvotjakovr: hi!23:42
votjakovrHeikoS: hi23:42
@HeikoSfinally I catch you23:42
@HeikoScould you update me a bit?23:42
votjakovrHeikoS: yeah, i've added a constructor for CParameterCombination to get it from SGObject23:43
@HeikoSvotjakovr: cool! so now you can extract this *all* parameters thing23:44
@HeikoSvotjakovr: it works already?23:44
votjakovrHeikoS: yeah, it walks recursively through the parameters23:44
@HeikoSvotjakovr: ok I keep a mental note of adding a unit test (later though)23:44
@HeikoSvotjakovr: whats next?23:44
votjakovrHeikoS: i need to covert ParameterCombination to vector and vice verse23:45
votjakovrHeikoS: since nlopt get arguments and gradients like a vector of doubles23:46
@sonney2klisitsyn, well wiking would know23:46
shogun-buildbotbuild #1518 of cyg1 - libshogun is complete: Failure [failed test]  Build details are at http://buildbot.shogun-toolbox.org/builders/cyg1%20-%20libshogun/builds/1518  blamelist: Sergey Lisitsyn <lisitsyn.s.o@gmail.com>23:47
@sonney2kHeikoS, well it only fails this single test right?23:47
@HeikoSvotjakovr: ok that seems straight-forward23:47
@HeikoSsonney2k: ?23:48
@sonney2kHeikoS, python modular!23:48
@HeikoSsonney2k: I cannot compile currently23:48
@sonney2kHeikoS, it compiles23:48
@HeikoSlatest git fresh build got an error23:48
@sonney2kHeikoS, but it only fails the test23:48
votjakovrHeikoS: but probably i future we can drop nlopt support, since i've found useful things in optimization/lbfgs23:48
@HeikoSsonney2k: I just sent a PR to see what happens in travis23:48
@HeikoSsonney2k: wait are integration tetss still part of travis?23:48
@sonney2kHeikoS, no23:49
@HeikoSvotjakovr: okay, that could be done at some point23:49
@HeikoSvotjakovr: but I dont know how reliable that stuff in there is. should be tested before :)23:49
@HeikoSsonney2k: then no use my PR ;)23:50
@HeikoSsonney2k: why is that disabled? we will start collecting broken tests this way23:50
@HeikoSvotjakovr: ok, so I guess this conversion will be fast23:51
@HeikoSvotjakovr: and then?23:51
@HeikoSvotjakovr: and, is the PR ready to merge already?23:51
@HeikoSvotjakovr: we dont want it to grow larger23:52
votjakovrHeikoS: not yet... and then check model selection by adding some another unit test for it23:53
@HeikoSvotjakovr: ok, do you think you will finish that today?23:53
votjakovrHeikoS: i've written one, while i'm debugging23:53
@HeikoSvotjakovr: I see, cool23:53
@HeikoSvotjakovr: so we might have the thing working later today?23:53
votjakovrHeikoS: yeah, i'll try to do it23:54
votjakovrHeikoS: do you have some time to look at that constructor?23:55
@HeikoSvotjakovr: ok, give your best ;)23:55
@HeikoSvotjakovr: yeah sure, is it  in the PR alredy?23:55
votjakovrHeikoS: i've updated it23:57
@HeikoSvotjakovr: checking.23:57
votjakovrHeikoS: now it has restricted functionality23:58
votjakovrHeikoS: just for gradient parameters23:58
@HeikoSvotjakovr: ok first thing, pls also include other float sizes in gradient23:59
--- Log closed Sun Sep 22 00:00:09 2013